Wrapper for several r packages and scripts to automate rnaseq analysis. For now its mostly my cloud storage with nice documentation for r functions that i use repeatedly. This is a readonly mirror of the cran r package repository. See the file install for details on how to install the rcplex package in linuxunixlike systems and windows systems. This is mainly a collection of random, or more accurately, clusters of random r functions ive written for personal and work projects over the years.
Stall for details on how to install the rcplex package in. Support for quadratically constrained programming is available. See the file install for details on how to install the rcplex package in linux unixlike and windows systems. R package for optimal matching in observational studies using mixed integer programming. Numerous methods for and operations on these matrices, using lapack and suitesparse libraries.
An r package includes a set of functions and datasets. In order to successfully install the packages provided on rforge, you have to switch to the most recent version of r or, alternatively, install from the. R packages are collections of functions and data sets developed by the community. This is the r interface to the c api of ibm ilog cplex.
Some r packages will not install without an active x window session, so if you are not logged in to a graphical interface on the machine you will need to connect via ssh with xforwarding enabled, such as with putty and vcxsrv on windows. In order to successfully install the packages provided on rforge, you have to switch to the most recent version of r or, alternatively, install. They increase the power of r by improving existing base r functionalities, or by adding new ones. Rcplex r interface to the ibm ilog cplex optimization library. R package which solves kernel ridge regression for various kernels brought to you by. In order to successfully install the packages provided on r forge, you have to switch to the most recent version of r or, alternatively, install from the. Documentation reproduced from package rcplex, version 0. Installing older versions of packages rstudio support. Installing every cran package in r on centos 7 clints blog. The problem is that the r package installer first downloads the lessr package, and all dependent external packages on which lessr depends, such as rcpp, to a temporary folder. For instance the mass package was developed by venables and ripley for their book modern applied statistics with s and the car package was developed by john fox for his book an r and s plus companion to applied regression. After a successful repackage you can then install the package at the command line.
Rforge provides these binaries only for the most recent version of r, but not for older versions. R installing the package rcplex just a guess based on evidence of failing to read other instructions that were made available, but have you perhaps forgotten to install rtools for windows. Pin remote resources locally to work offline and cache results with ease, pin stores resources in boards. Improved foreign function interface ffi and dynamic bindings to c libraries e. Enhances the r optimization infrastructure roi package by registering the cplex commercial solver. R interface to cplex solvers for linear, quadratic, and linear and. I dont expect it to be immediately useful to the general population of r users. The contents of each package are stored in its own folder inside this temporary folder. A rich hierarchy of matrix classes, including triangular, symmetric, and diagonal matrices, both dense and sparse and with pattern, logical and numeric entries. Once you download a package you should be able to access its contents every time you open r because the package information gets stored in your r program files. Installing a package from a url alternatively you can install a.
When i use that line, i received the following messages from r. Just a guess based on evidence of failing to read other instructions that were made available, but have you perhaps forgotten to install. For example, the parallelfor function can be used to convert the work of a standard serial for loop into a parallel one and the parallelreduce function can be used for accumulating aggregate or other values the high level interface enables safe and robust parallel programming without direct manipulation of. Select and download climate data from dwd german weather service rdyncall. In one of the packages source files, it has already been mentioned that r interface to c api of ibm ilog cplex version 12. However if there is a glitch it is simple to install a package again.
If the list of available packages is not given as argument, it is obtained from repositories. R interface to cplex solvers for linear, quadratic, and linear and quadratic mixed integer programs. R programmingpackages wikibooks, open books for an open. The package was tested using this flavor of cplex 12. High level functions for doing parallel programming with rcpp. Enhances seriation, rcplex license gpl2 author david meyer aut, kurt hornik aut, cre, christian buchta ctb. Description r interface to cplex solvers for linear, quadratic, and linear and. Location of your r library get the rcpp package manually. See the file install for details on how to install the rcplex package in linuxunixlike and windows systems. See the file install for details on how to install the rcplex package in. Below is a list of all packages provided by project rcplex important note for package binaries. R forge provides these binaries only for the most recent version of r, but not for older versions. An r package for retrieving data from david into r objects using web services api.
Packages are often developed as supplementary material to books. It allows for solving mixed integer quadratically constrained programming miqpqc problems as well as all variantscombinations of lp, qp, qcp, ip. By solving a mixed integer programming problem, mipmatch directly balances multiple features of the empirical distributions of the observed covariates. Ibm ilog cplex optimization studio academic research. For example, if you are usually working with data frames, probably you will have heard about dplyr or data. Below is a list of all packages provided by project plantbreeding important note for package binaries. Build and install the r package in search box, type command prompt in command prompt, change directory to the place that contains the r package build r package using r cmd build pkgname. R installing the package rcplex from david winsemius.
811 1399 135 317 1127 1409 274 276 893 1348 1374 950 1094 1026 1454 482 1115 1139 747 252 27 615 922 1262 752 431 99 617